NR5A2 gene affects the overall survival of LUAD patients by regulating the activity of CSCs through SNP pathway by OCLR algorithm and immune score

NR5A2 gene affects the overall survival of LUAD patients by regulating the activity of CSCs through SNP pathway by OCLR algorithm and immune score

28 March 2024 | Liusheng Wu, Xiaofan Chen, Qi Zeng, Zelin Lai, Zhengyang Fan, Xin Ruan, Xiaoqiang Li, Jun Yan
This study investigates the role of the *NR5A2* gene in lung adenocarcinoma (LUAD) by analyzing its expression and impact on cancer stem cells (CSCs) through bioinformatics methods. The authors used the One-Class Linear Regression (OLCR) algorithm and immune scoring systems to explore the regulatory mechanisms of *NR5A2* on CSC activity and its effect on overall survival. Key findings include: 1. **Expression and Prognosis**: *NR5A2* expression was significantly lower in LUAD tissues compared to normal lung tissues, and its decreased expression was associated with shorter overall and progression-free survival in LUAD patients. 2. **CSC Regulation**: *NR5A2* may regulate LUAD CSCs through selective splicing mutations, affecting tumor growth, self-renewal, and drug resistance. 3. **SNP Pathway**: The study identified that *NR5A2* mutations, particularly single nucleotide polymorphisms (SNPs), are significant in LUAD CSCs, influencing immune cell infiltration and drug resistance. 4. **Prognostic Model**: A nomogram was developed to predict 1-, 3-, and 5-year overall recurrence rates based on *NR5A2* expression and patient age, showing good agreement between predictions and actual observations. 5. **Biological Functions**: GO and KEGG analyses revealed that *NR5A2* is involved in cell division, drug resistance, and apoptosis pathways, which indirectly affect the survival prognosis of LUAD patients. 6. **Clinical Implications**: The study highlights the potential of *NR5A2* as a therapeutic target and a prognostic marker for LUAD, providing new insights into the molecular mechanisms of LUAD and potential therapeutic strategies. The study concludes that *NR5A2* plays a crucial role in regulating CSC activity and overall survival in LUAD, offering a new perspective for understanding and treating this disease.This study investigates the role of the *NR5A2* gene in lung adenocarcinoma (LUAD) by analyzing its expression and impact on cancer stem cells (CSCs) through bioinformatics methods. The authors used the One-Class Linear Regression (OLCR) algorithm and immune scoring systems to explore the regulatory mechanisms of *NR5A2* on CSC activity and its effect on overall survival. Key findings include: 1. **Expression and Prognosis**: *NR5A2* expression was significantly lower in LUAD tissues compared to normal lung tissues, and its decreased expression was associated with shorter overall and progression-free survival in LUAD patients. 2. **CSC Regulation**: *NR5A2* may regulate LUAD CSCs through selective splicing mutations, affecting tumor growth, self-renewal, and drug resistance. 3. **SNP Pathway**: The study identified that *NR5A2* mutations, particularly single nucleotide polymorphisms (SNPs), are significant in LUAD CSCs, influencing immune cell infiltration and drug resistance. 4. **Prognostic Model**: A nomogram was developed to predict 1-, 3-, and 5-year overall recurrence rates based on *NR5A2* expression and patient age, showing good agreement between predictions and actual observations. 5. **Biological Functions**: GO and KEGG analyses revealed that *NR5A2* is involved in cell division, drug resistance, and apoptosis pathways, which indirectly affect the survival prognosis of LUAD patients. 6. **Clinical Implications**: The study highlights the potential of *NR5A2* as a therapeutic target and a prognostic marker for LUAD, providing new insights into the molecular mechanisms of LUAD and potential therapeutic strategies. The study concludes that *NR5A2* plays a crucial role in regulating CSC activity and overall survival in LUAD, offering a new perspective for understanding and treating this disease.
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Understanding NR5A2 gene affects the overall survival of LUAD patients by regulating the activity of CSCs through SNP pathway by OCLR algorithm and immune score