A core gut microbiome in obese and lean twins

A core gut microbiome in obese and lean twins

2009 January 22 | Peter J. Turnbaugh¹, Micah Hamady³, Tanya Yatsunenko¹, Brandi L. Cantare¹⁵, Alexis Duncan², Ruth E. Ley¹, Mitchell L. Sogin⁶, William J. Jones⁷, Bruce A. Roe⁸, Jason P. Affourtit⁹, Michael Egholm⁹, Bernard Henrissat⁵, Andrew C. Heath², Rob Knight⁴, and Jeffrey I. Gordon¹
A study published in Nature (2009) investigated the gut microbiome of obese and lean twins to understand how host genotype, environment, and adiposity influence microbial communities. The research analyzed fecal samples from 154 individuals, including 31 monozygotic (MZ) and 23 dizygotic (DZ) twin pairs, along with their mothers. The study revealed that while the gut microbiome of family members shares a core set of genes, individual microbial communities vary in specific bacterial lineages. Obesity was associated with changes in microbiota composition, reduced bacterial diversity, and altered metabolic pathways. The findings suggest that a core microbiome exists at the functional level, with deviations linked to physiological states like obesity versus leanness. The study used 16S rRNA sequencing and shotgun pyrosequencing to analyze microbial communities. Results showed that the gut microbiome of MZ twins was more similar to each other than DZ twins, and that microbial communities were more similar within families than between unrelated individuals. However, the degree of similarity between MZ and DZ twin pairs was comparable. The research also identified a core microbiome at the gene level, with many functional groups shared across individuals. The study found that obesity was associated with a significant decrease in microbial diversity and changes in metabolic pathways. The gut microbiome of obese individuals showed a higher proportion of Actinobacteria and lower proportions of Bacteroidetes compared to lean individuals. Functional analysis revealed that the core microbiome includes genes involved in carbohydrate metabolism, transport, and other essential functions. The study also identified microbial biomarkers associated with obesity, including genes involved in carbohydrate, lipid, and amino acid metabolism. The research highlights the importance of the gut microbiome in health and disease, and suggests that a core microbiome exists at the functional level, with variations linked to physiological states. The findings have implications for understanding microbial adaptation and community assembly in different environments. The study provides insights into the role of host genotype and environmental factors in shaping the gut microbiome.A study published in Nature (2009) investigated the gut microbiome of obese and lean twins to understand how host genotype, environment, and adiposity influence microbial communities. The research analyzed fecal samples from 154 individuals, including 31 monozygotic (MZ) and 23 dizygotic (DZ) twin pairs, along with their mothers. The study revealed that while the gut microbiome of family members shares a core set of genes, individual microbial communities vary in specific bacterial lineages. Obesity was associated with changes in microbiota composition, reduced bacterial diversity, and altered metabolic pathways. The findings suggest that a core microbiome exists at the functional level, with deviations linked to physiological states like obesity versus leanness. The study used 16S rRNA sequencing and shotgun pyrosequencing to analyze microbial communities. Results showed that the gut microbiome of MZ twins was more similar to each other than DZ twins, and that microbial communities were more similar within families than between unrelated individuals. However, the degree of similarity between MZ and DZ twin pairs was comparable. The research also identified a core microbiome at the gene level, with many functional groups shared across individuals. The study found that obesity was associated with a significant decrease in microbial diversity and changes in metabolic pathways. The gut microbiome of obese individuals showed a higher proportion of Actinobacteria and lower proportions of Bacteroidetes compared to lean individuals. Functional analysis revealed that the core microbiome includes genes involved in carbohydrate metabolism, transport, and other essential functions. The study also identified microbial biomarkers associated with obesity, including genes involved in carbohydrate, lipid, and amino acid metabolism. The research highlights the importance of the gut microbiome in health and disease, and suggests that a core microbiome exists at the functional level, with variations linked to physiological states. The findings have implications for understanding microbial adaptation and community assembly in different environments. The study provides insights into the role of host genotype and environmental factors in shaping the gut microbiome.
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