Intrinsic noise in gene regulatory networks

Intrinsic noise in gene regulatory networks

July 17, 2001 | vol. 98 | no. 15 | Mukund Thattai and Alexander van Oudenaarden*
This article by Mukund Thattai and Alexander van Oudenaarden explores the intrinsic noise in gene regulatory networks, focusing on how stochastic fluctuations affect genetic systems. It presents an analytic model to understand the noise properties of genetic systems, showing that noise is primarily determined at the translational level. The study reveals that the mean and variance of protein concentration can be independently controlled, and that noise strength immediately after gene induction is nearly twice the final steady-state value. The paper also discusses how fluctuations in regulatory proteins can propagate through genetic cascades and how negative feedback in autoregulatory systems can efficiently reduce noise. The model is applied to various gene regulatory modules, including autocatalytic proteins and bistable switches, demonstrating the importance of network structure in noise control. The analysis shows that intrinsic noise plays a crucial role in the function and evolution of gene regulatory networks, and that understanding noise can provide insights into the design and stability of synthetic biological systems. The study highlights the importance of considering noise in genetic systems and the potential for noise to be harnessed for biological functions. The paper also addresses the limitations of the analytic model, including the effects of cell division and the nonlinear nature of biochemical systems, and emphasizes the need for further research to fully understand the role of noise in gene regulation.This article by Mukund Thattai and Alexander van Oudenaarden explores the intrinsic noise in gene regulatory networks, focusing on how stochastic fluctuations affect genetic systems. It presents an analytic model to understand the noise properties of genetic systems, showing that noise is primarily determined at the translational level. The study reveals that the mean and variance of protein concentration can be independently controlled, and that noise strength immediately after gene induction is nearly twice the final steady-state value. The paper also discusses how fluctuations in regulatory proteins can propagate through genetic cascades and how negative feedback in autoregulatory systems can efficiently reduce noise. The model is applied to various gene regulatory modules, including autocatalytic proteins and bistable switches, demonstrating the importance of network structure in noise control. The analysis shows that intrinsic noise plays a crucial role in the function and evolution of gene regulatory networks, and that understanding noise can provide insights into the design and stability of synthetic biological systems. The study highlights the importance of considering noise in genetic systems and the potential for noise to be harnessed for biological functions. The paper also addresses the limitations of the analytic model, including the effects of cell division and the nonlinear nature of biochemical systems, and emphasizes the need for further research to fully understand the role of noise in gene regulation.
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