JASPAR: an open-access database for eukaryotic transcription factor binding profiles

JASPAR: an open-access database for eukaryotic transcription factor binding profiles

2004, Vol. 32, Database issue | Albin Sandelin, Wynand Alkema, Pär Engström, Wyeth W. Wasserman and Boris Lenhard
JASPAR is an open-access database that provides high-quality, matrix-based transcription factor binding site profiles for multicellular eukaryotes. The profiles are derived from experimentally validated nucleotide sequences and are curated to ensure reliability. The database includes a web interface for browsing, searching, and subset selection, as well as programming tools for genome-wide and comparative genomic analysis. The content of the database is regularly updated with new data, and it is integrated with the TFBS Perl framework for advanced sequence analysis. JASPAR offers a non-redundant collection of reliable binding profiles, unrestricted data access, and powerful coupling with programming tools, making it a valuable resource for researchers in the field of regulatory sequence analysis.JASPAR is an open-access database that provides high-quality, matrix-based transcription factor binding site profiles for multicellular eukaryotes. The profiles are derived from experimentally validated nucleotide sequences and are curated to ensure reliability. The database includes a web interface for browsing, searching, and subset selection, as well as programming tools for genome-wide and comparative genomic analysis. The content of the database is regularly updated with new data, and it is integrated with the TFBS Perl framework for advanced sequence analysis. JASPAR offers a non-redundant collection of reliable binding profiles, unrestricted data access, and powerful coupling with programming tools, making it a valuable resource for researchers in the field of regulatory sequence analysis.
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