Vol. 12, 323–337, February 2001 | Helen C. Causton, Bing Ren, Sang Seok Koh, Christopher T. Harbison, Elenita Kanin, Ezra G. Jennings, Tong Ihn Lee, Heather L. True, Eric S. Lander, and Richard A. Young
This study investigates how gene expression in *Saccharomyces cerevisiae* is remodeled in response to various environmental changes, including temperature, oxidation, nutrients, pH, and osmolarity. Using genome-wide expression analysis, the researchers found that over half of the yeast genome is involved in these responses, identifying a global set of genes induced and repressed by each condition. The results implicate many previously uncharacterized genes in these responses and reveal a signature common to environmental responses involving approximately 10% of yeast genes. Expression analysis with *MSN2/MSN4* mutants supports the model that the Msn2/Msn4 activators induce the common response to environmental change. These findings provide a comprehensive description of the transcriptional response to environmental changes and enhance our understanding of the role of activators in this process.This study investigates how gene expression in *Saccharomyces cerevisiae* is remodeled in response to various environmental changes, including temperature, oxidation, nutrients, pH, and osmolarity. Using genome-wide expression analysis, the researchers found that over half of the yeast genome is involved in these responses, identifying a global set of genes induced and repressed by each condition. The results implicate many previously uncharacterized genes in these responses and reveal a signature common to environmental responses involving approximately 10% of yeast genes. Expression analysis with *MSN2/MSN4* mutants supports the model that the Msn2/Msn4 activators induce the common response to environmental change. These findings provide a comprehensive description of the transcriptional response to environmental changes and enhance our understanding of the role of activators in this process.