Selective and cross-reactive SARS-CoV-2 T cell epitopes in unexposed humans

Selective and cross-reactive SARS-CoV-2 T cell epitopes in unexposed humans

2 October 2020 | Jose Mateus, Alba Griffoni, Alison Tarke, John Sidney, Sydney I. Ramirez, Jennifer M. Dan, Zoe C. Burger, Stephen A. Rawlings, Davey M. Smith, Elizabeth Phillips, Simon Mallal, Marshall Lammers, Paul Rubio, Lorenzo Quibao, Aaron Sutherland, Esther Dawn Yu, Ricardo da Silva Antunes, Jason Greenbaum, April Frazier, Aravinda de Silva, Björn Peters, Shane Crotty, Alessandro Sette
The study investigates the presence and characteristics of preexisting cross-reactive CD4+ T cell memory in unexposed individuals to the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). Using blood samples collected before the discovery of SARS-CoV-2 in 2019, researchers identified 142 T cell epitopes across the SARS-CoV-2 genome. These epitopes were found to be cross-reactive with common cold coronaviruses (HCoVs) such as HCoV-OC43, HCoV-229E, HCoV-NL63, and HCoV-HKU1, suggesting that preexisting T cell memory to these coronaviruses may contribute to the observed heterogeneity in COVID-19 disease severity. The study also found that the majority of SARS-CoV-2-reactive T cells were CD4+ and predominantly recognized epitopes from the spike protein, which is associated with more severe disease. Additionally, the researchers demonstrated that preexisting cross-reactive T cell memory to HCoVs could be modulated by COVID-19 exposure, and that these memory T cells were predominantly effector and central memory cells. These findings highlight the potential role of preexisting cross-reactive T cell memory in influencing COVID-19 outcomes and suggest that further research is needed to understand the implications for vaccine development and disease severity.The study investigates the presence and characteristics of preexisting cross-reactive CD4+ T cell memory in unexposed individuals to the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). Using blood samples collected before the discovery of SARS-CoV-2 in 2019, researchers identified 142 T cell epitopes across the SARS-CoV-2 genome. These epitopes were found to be cross-reactive with common cold coronaviruses (HCoVs) such as HCoV-OC43, HCoV-229E, HCoV-NL63, and HCoV-HKU1, suggesting that preexisting T cell memory to these coronaviruses may contribute to the observed heterogeneity in COVID-19 disease severity. The study also found that the majority of SARS-CoV-2-reactive T cells were CD4+ and predominantly recognized epitopes from the spike protein, which is associated with more severe disease. Additionally, the researchers demonstrated that preexisting cross-reactive T cell memory to HCoVs could be modulated by COVID-19 exposure, and that these memory T cells were predominantly effector and central memory cells. These findings highlight the potential role of preexisting cross-reactive T cell memory in influencing COVID-19 outcomes and suggest that further research is needed to understand the implications for vaccine development and disease severity.
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[slides and audio] Selective and cross-reactive SARS-CoV-2 T cell epitopes in unexposed humans