Structure, Function, and Evolution of Bacterial ATP-Binding Cassette Systems

Structure, Function, and Evolution of Bacterial ATP-Binding Cassette Systems

June 2008 | Amy L. Davidson, Elie Dassa, Cedric Orelle, Jue Chen
The ATP-binding cassette (ABC) systems are a large superfamily of paralogous sequences that share a highly conserved ATP-hydrolyzing domain or protein. These systems are involved in a wide range of biological functions, including transmembrane transport, translation elongation, and DNA repair. The ABC systems can be categorized into three main functional classes: importers, exporters, and others. Importers mediate the uptake of various substrates such as sugars, ions, amino acids, and vitamins, while exporters are involved in the secretion of peptides, lipids, drugs, and proteins. The third category includes systems that are not directly involved in transport but are involved in processes like mRNA translation and DNA repair. The ABC systems have a conserved structure consisting of two hydrophobic membrane-spanning domains and two hydrophilic domains. High-resolution structures of ABC modules have been determined, revealing a highly conserved fold. The mechanism of ATP hydrolysis in ABC systems is still under investigation, but it is believed to involve conformational changes that couple the energy of ATP hydrolysis to the transport process. The role of the two nucleotide-binding sites in this process is also a subject of ongoing research. The ABC systems are found in all three domains of life (Bacteria, Archaea, and Eukarya), with species-specific differences observed. Comparative genomics studies have shown that the number of ABC systems in a genome is generally proportional to the size of the genome. The ABC systems have diverse functions and have evolved to serve various physiological roles in bacteria and other organisms.The ATP-binding cassette (ABC) systems are a large superfamily of paralogous sequences that share a highly conserved ATP-hydrolyzing domain or protein. These systems are involved in a wide range of biological functions, including transmembrane transport, translation elongation, and DNA repair. The ABC systems can be categorized into three main functional classes: importers, exporters, and others. Importers mediate the uptake of various substrates such as sugars, ions, amino acids, and vitamins, while exporters are involved in the secretion of peptides, lipids, drugs, and proteins. The third category includes systems that are not directly involved in transport but are involved in processes like mRNA translation and DNA repair. The ABC systems have a conserved structure consisting of two hydrophobic membrane-spanning domains and two hydrophilic domains. High-resolution structures of ABC modules have been determined, revealing a highly conserved fold. The mechanism of ATP hydrolysis in ABC systems is still under investigation, but it is believed to involve conformational changes that couple the energy of ATP hydrolysis to the transport process. The role of the two nucleotide-binding sites in this process is also a subject of ongoing research. The ABC systems are found in all three domains of life (Bacteria, Archaea, and Eukarya), with species-specific differences observed. Comparative genomics studies have shown that the number of ABC systems in a genome is generally proportional to the size of the genome. The ABC systems have diverse functions and have evolved to serve various physiological roles in bacteria and other organisms.
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Understanding Structure%2C Function%2C and Evolution of Bacterial ATP-Binding Cassette Systems